< Back to small molecule database

BDBM214147

E3L009074
Internal ID: BDB009074
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB009074/BDB009074.sdf
Basic Properties
Compound ID
E3L009074
Internal ID
BDB009074
Molecular formula
C32H29F3N6O2
Molecular weight
586.618000
Exact mass
586.230409
XLogP
7.6027
TPSA
104.9600
HBA / HBD
6 / 3
Rotatable bonds
9
Heavy atoms / rings
43 / 6
Activity summary
IC50 unknown 76.00000000 nM
1 activity record(s) imported
InChIKey
JHUGEQLYFZJRBF-LJQANCHMSA-N
SMILES
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(Nc4ccccc4)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
Aliases
BDBM214147 (preferred) 6-{[(1r)-1-Cyclobutylethyl]amino}-8-[3-(phenylamino)phenyl]-7-[4-(trifluoromethyl)benzyl]-7h-purine-2-carboxylic acid (source_name) BDBM214147 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM214147 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM214147 Open - 10.7270/Q2RF5X1F
PubChem CID90318457 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(Nc4ccccc4)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB009074/BDB009074.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB009074/BDB009074.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB009074/BDB009074.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB009074/BDB009074.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB009074/BDB009074.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM214147 IC50 76 nM High DOI: 10.7270/Q2RF5X1F 1