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BDBM215010

E3L009539
Internal ID: BDB009539
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB009539/BDB009539.sdf
Basic Properties
Compound ID
E3L009539
Internal ID
BDB009539
Molecular formula
C26H22ClN5O2S
Molecular weight
504.015000
Exact mass
503.118274
XLogP
6.3183
TPSA
92.9300
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
35 / 6
Activity summary
IC50 unknown 259.00000000 nM
1 activity record(s) imported
InChIKey
VYDVBUHEXZQWED-CQSZACIVSA-N
SMILES
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4sccc4c3)n(Cc3ccc(Cl)cc3)c12)C1CC1
Aliases
BDBM215010 (preferred) 8-(1-benzothiophen-5-yl)-7-[(4-chlorophenyl)methyl]-6-{[(1R)-1-cyclopropylethyl]amino}-7H-purine-2-carboxylic acid (source_name) BDBM215010 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM215010 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM215010 Open - 10.7270/Q2RF5X1F
PubChem CID90319650 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4sccc4c3)n(Cc3ccc(Cl)cc3)c12)C1CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB009539/BDB009539.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB009539/BDB009539.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB009539/BDB009539.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB009539/BDB009539.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB009539/BDB009539.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215010 IC50 259 nM Moderate DOI: 10.7270/Q2RF5X1F 1