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BDBM215060

E3L009552
Internal ID: BDB009552
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB009552/BDB009552.sdf
Basic Properties
Compound ID
E3L009552
Internal ID
BDB009552
Molecular formula
C26H31Cl2NO5
Molecular weight
508.442000
Exact mass
507.157928
XLogP
5.5831
TPSA
76.0700
HBA / HBD
4 / 1
Rotatable bonds
11
Heavy atoms / rings
34 / 3
Activity summary
IC50 unknown 90.00000000 nM
1 activity record(s) imported
InChIKey
LUQHKHJXEOHCBW-ZITMKZNDSA-N
SMILES
CC[C@@H](COCCOC)N1C(=O)[C@@H](CC(=O)O)C[C@H](c2cccc(Cl)c2)C1c1ccc(Cl)cc1
Aliases
BDBM215060 (preferred) 2-[(3R,5R)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-1-[(2S)-1-(2-methoxyethoxy)butan-2-yl]-2-oxopiperidin-3-yl]acetic acid (source_name) BDBM215060 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM215060 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM215060 Open - 10.7270/Q29022M2
PubChem CID117656702 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC[C@@H](COCCOC)N1C(=O)[C@@H](CC(=O)O)C[C@H](c2cccc(Cl)c2)C1c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB009552/BDB009552.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB009552/BDB009552.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB009552/BDB009552.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB009552/BDB009552.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB009552/BDB009552.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215060 IC50 90 nM High DOI: 10.7270/Q29022M2 1