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BDBM215182

E3L009670
Internal ID: BDB009670
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB009670/BDB009670.sdf
Basic Properties
Compound ID
E3L009670
Internal ID
BDB009670
Molecular formula
C26H28Cl2F3NO5
Molecular weight
562.412000
Exact mass
561.129663
XLogP
5.9435
TPSA
98.0700
HBA / HBD
4 / 3
Rotatable bonds
8
Heavy atoms / rings
37 / 3
Activity summary
IC50 unknown 2.00000000 nM
4 activity record(s) imported
InChIKey
HAJXHIZZRZCMQU-LNGMVNIQSA-N
SMILES
CC[C@@H](CC(O)(O)C(F)(F)F)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
Aliases
BDBM215182 (preferred) 2-[(3R,5R,6S)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-3-methyl-2-oxo-1-[(3S)-6,6,6-trifluoro-5,5-dihydroxyhexan-3-yl]piperidin-3-yl]acetic acid (source_name) BDBM215182 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM215182 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM215182 Open - 10.7270/Q20P1232; 10.7270/Q29022M2
PubChem CID67999182 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC[C@@H](CC(O)(O)C(F)(F)F)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB009670/BDB009670.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB009670/BDB009670.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB009670/BDB009670.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB009670/BDB009670.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB009670/BDB009670.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215182 IC50 10 nM Very high DOI: 10.7270/Q20P1232 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215182 IC50 10 nM Very high DOI: 10.7270/Q29022M2 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215182 IC50 2 nM Very high DOI: 10.7270/Q29022M2 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215182 IC50 2 nM Very high DOI: 10.7270/Q20P1232 1