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BDBM215278

E3L009761
Internal ID: BDB009761
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB009761/BDB009761.sdf
Basic Properties
Compound ID
E3L009761
Internal ID
BDB009761
Molecular formula
C29H27Cl2F3N2O3
Molecular weight
579.446000
Exact mass
578.135083
XLogP
8.0967
TPSA
70.5000
HBA / HBD
3 / 1
Rotatable bonds
7
Heavy atoms / rings
39 / 4
Activity summary
IC50 unknown 1.00000000 nM
2 activity record(s) imported
InChIKey
SZXDWVWSLKOPAI-PKZARACNSA-N
SMILES
CC[C@@H](c1cccc(C(F)(F)F)n1)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
Aliases
BDBM215278 (preferred) 2-[(3R,5R,6S)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-3-methyl-2-oxo-1-[(1S)-1-[6-(trifluoromethyl)pyridin-2-yl]propyl]piperidin-3-yl]acetic acid (source_name) BDBM215278 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM215278 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM215278 Open - 10.7270/Q20P1232; 10.7270/Q29022M2
PubChem CID68000619 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC[C@@H](c1cccc(C(F)(F)F)n1)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB009761/BDB009761.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB009761/BDB009761.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB009761/BDB009761.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB009761/BDB009761.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB009761/BDB009761.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215278 IC50 1 nM Very high DOI: 10.7270/Q29022M2 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM215278 IC50 1 nM Very high DOI: 10.7270/Q20P1232 1