< Back to small molecule database

BDBM215294

E3L009777
Internal ID: BDB009777
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB009777/BDB009777.sdf
Basic Properties
Compound ID
E3L009777
Internal ID
BDB009777
Molecular formula
C29H34Cl2N2O5S
Molecular weight
593.573000
Exact mass
592.156549
XLogP
5.7821
TPSA
103.7800
HBA / HBD
4 / 2
Rotatable bonds
11
Heavy atoms / rings
39 / 5
Activity summary
IC50 < 1.00000000 nM
2 activity record(s) imported
InChIKey
CKRGKEOKLKHYCW-GCMXZSHTSA-N
SMILES
CC[C@]1(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@@H](c2ccc(Cl)cc2)N([C@H](CNS(=O)(=O)C2CC2)C2CC2)C1=O
Aliases
BDBM215294 (preferred) 2-((3R,5R,6S)-5-(3-Chlorophenyl)-6-(4-chlorophenyl)-1-((S)-2-(cyclopropanesulfonamido)-1-cyclopropylethyl)-3-ethyl-2-oxopiperidin-3-yl)acetic acid (source_name) BDBM215294 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM215294 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM215294 Open - 10.7270/Q20P1232; 10.7270/Q29022M2
PubChem CID67999573 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC[C@]1(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@@H](c2ccc(Cl)cc2)N([C@H](CNS(=O)(=O)C2CC2)C2CC2)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB009777/BDB009777.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB009777/BDB009777.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB009777/BDB009777.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB009777/BDB009777.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB009777/BDB009777.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM215294 IC50 <1 nM Very high DOI: 10.7270/Q20P1232 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM215294 IC50 <1 nM Very high DOI: 10.7270/Q29022M2 1