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BDBM218428

E3L010003
Internal ID: BDB010003
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010003/BDB010003.sdf
Basic Properties
Compound ID
E3L010003
Internal ID
BDB010003
Molecular formula
C29H32ClN5O4
Molecular weight
550.059000
Exact mass
549.214282
XLogP
5.8273
TPSA
111.3900
HBA / HBD
7 / 2
Rotatable bonds
11
Heavy atoms / rings
39 / 5
Activity summary
IC50 unknown 55.00000000 nM
1 activity record(s) imported
InChIKey
UUYFPJVZEDIYOE-GOSISDBHSA-N
SMILES
COCCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(Cl)cc1
Aliases
BDBM218428 (preferred) (r)-7-(4-Chlorobenzyl)-6-((1-cydclobutylethyl)amino)-8-(2-(2-methoxyethoxy)-5-methylphenyl)-7h-purine-2-carboxylic acid (source_name) BDBM218428 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM218428 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM218428 Open - 10.7270/Q2RF5X1F
PubChem CID90325391 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010003/BDB010003.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010003/BDB010003.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010003/BDB010003.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010003/BDB010003.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010003/BDB010003.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM218428 IC50 55 nM High DOI: 10.7270/Q2RF5X1F 1