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BDBM218594

E3L010015
Internal ID: BDB010015
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010015/BDB010015.sdf
Basic Properties
Compound ID
E3L010015
Internal ID
BDB010015
Molecular formula
C28H30ClN5O4
Molecular weight
536.032000
Exact mass
535.198632
XLogP
5.1732
TPSA
122.3900
HBA / HBD
7 / 3
Rotatable bonds
11
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 112.00000000 nM
1 activity record(s) imported
InChIKey
FHPSGAHPAGBDCF-QGZVFWFLSA-N
SMILES
Cc1ccc(OCCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
Aliases
BDBM218594 (preferred) (r)-7-(4-Chlorobenzyl)-6-((1-cyclopropylethyl) amino)-8-(2-(3-hydroxypropoxy)-5-methylphenyl)-7h-purine-2-carboxylic acid (source_name) BDBM218594 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM218594 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM218594 Open - 10.7270/Q2RF5X1F
PubChem CID90318177 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc(OCCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010015/BDB010015.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010015/BDB010015.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010015/BDB010015.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010015/BDB010015.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010015/BDB010015.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM218594 IC50 112 nM Moderate DOI: 10.7270/Q2RF5X1F 1