< Back to small molecule database

BDBM222681

E3L010261
Internal ID: BDB010261
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010261/BDB010261.sdf
Basic Properties
Compound ID
E3L010261
Internal ID
BDB010261
Molecular formula
C28H33F3N6O3
Molecular weight
558.605000
Exact mass
558.256624
XLogP
5.4543
TPSA
113.2400
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
40 / 5
Activity summary
IC50 unknown 22.00000000 nM
1 activity record(s) imported
InChIKey
QBISLAWMZPMIJH-MRXNPFEDSA-N
SMILES
C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)N3CCCC(C)(C)C3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
Aliases
BDBM222681 (preferred) 6-{[(1r)-1-Cyclobutylethyl]amino}-8-[(3,3-dimethylpiperidin-1-yl)carbonyl]-7-[4-(trifluoromethyl)benzyl]-7h-purine-2-carboxylic acid (source_name) BDBM222681 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM222681 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM222681 Open - 10.7270/Q2RF5X1F
PubChem CID90325012 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)N3CCCC(C)(C)C3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010261/BDB010261.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010261/BDB010261.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010261/BDB010261.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010261/BDB010261.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010261/BDB010261.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM222681 IC50 22 nM High DOI: 10.7270/Q2RF5X1F 1