< Back to small molecule database

BDBM223611

E3L010330
Internal ID: BDB010330
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010330/BDB010330.sdf
Basic Properties
Compound ID
E3L010330
Internal ID
BDB010330
Molecular formula
C30H46N8O2
Molecular weight
550.752000
Exact mass
550.374373
XLogP
6.0014
TPSA
117.7600
HBA / HBD
8 / 2
Rotatable bonds
8
Heavy atoms / rings
40 / 6
Activity summary
IC50 unknown 6.97600000 nM
1 activity record(s) imported
InChIKey
DHSSJBWLPQIUPT-ILTMHZNQSA-N
SMILES
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCCC3CC(C)(C)C)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
Aliases
BDBM223611 (preferred) BDBM223611 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM223611 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM223611 Open - 10.7270/Q2RF5X1F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCCC3CC(C)(C)C)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010330/BDB010330.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010330/BDB010330.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010330/BDB010330.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010330/BDB010330.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010330/BDB010330.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM223611 IC50 6.976 nM Very high DOI: 10.7270/Q2RF5X1F 1