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BDBM223678

E3L010390
Internal ID: BDB010390
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010390/BDB010390.sdf
Basic Properties
Compound ID
E3L010390
Internal ID
BDB010390
Molecular formula
C26H36F2N8O3
Molecular weight
546.623000
Exact mass
546.287843
XLogP
4.0683
TPSA
126.9900
HBA / HBD
9 / 2
Rotatable bonds
7
Heavy atoms / rings
39 / 6
Activity summary
IC50 unknown 9.23600000 nM
1 activity record(s) imported
InChIKey
GMGQZACESLHAKJ-BRWVUGGUSA-N
SMILES
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCOCC(F)(F)C3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
Aliases
BDBM223678 (preferred) BDBM223678 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM223678 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM223678 Open - 10.7270/Q2RF5X1F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCOCC(F)(F)C3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010390/BDB010390.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010390/BDB010390.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010390/BDB010390.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010390/BDB010390.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010390/BDB010390.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM223678 IC50 9.236 nM Very high DOI: 10.7270/Q2RF5X1F 1