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BDBM223686

E3L010398
Internal ID: BDB010398
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010398/BDB010398.sdf
Basic Properties
Compound ID
E3L010398
Internal ID
BDB010398
Molecular formula
C31H38N10O2
Molecular weight
582.713000
Exact mass
582.317920
XLogP
5.5986
TPSA
155.2300
HBA / HBD
9 / 4
Rotatable bonds
10
Heavy atoms / rings
43 / 7
Activity summary
IC50 unknown 215.00000000 nM
1 activity record(s) imported
InChIKey
NQGWZFGMLMNTRU-VAMGGRTRSA-N
SMILES
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(NCc3c[nH]nc3-c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
Aliases
BDBM223686 (preferred) BDBM223686 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM223686 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM223686 Open - 10.7270/Q2RF5X1F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(NCc3c[nH]nc3-c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010398/BDB010398.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010398/BDB010398.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010398/BDB010398.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010398/BDB010398.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010398/BDB010398.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM223686 IC50 215 nM Moderate DOI: 10.7270/Q2RF5X1F 1