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BDBM223724

E3L010421
Internal ID: BDB010421
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010421/BDB010421.sdf
Basic Properties
Compound ID
E3L010421
Internal ID
BDB010421
Molecular formula
C27H35F3N8O2
Molecular weight
560.625000
Exact mass
560.283507
XLogP
4.9834
TPSA
117.7600
HBA / HBD
8 / 2
Rotatable bonds
7
Heavy atoms / rings
40 / 7
Activity summary
IC50 unknown 3.08800000 nM
1 activity record(s) imported
InChIKey
MHBDJEPLDLOFGL-CEULFALRSA-N
SMILES
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CC4CC4C3C(F)(F)F)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
Aliases
BDBM223724 (preferred) BDBM223724 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM223724 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM223724 Open - 10.7270/Q2RF5X1F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CC4CC4C3C(F)(F)F)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010421/BDB010421.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010421/BDB010421.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010421/BDB010421.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010421/BDB010421.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010421/BDB010421.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM223724 IC50 3.088 nM Very high DOI: 10.7270/Q2RF5X1F 1