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BDBM224212

E3L010640
Internal ID: BDB010640
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB010640/BDB010640.sdf
Basic Properties
Compound ID
E3L010640
Internal ID
BDB010640
Molecular formula
C28H33ClN8O3
Molecular weight
565.078000
Exact mass
564.236415
XLogP
4.8591
TPSA
127.8500
HBA / HBD
9 / 1
Rotatable bonds
5
Heavy atoms / rings
40 / 7
Activity summary
IC50 unknown 35.00000000 nM
1 activity record(s) imported
InChIKey
PPNAAEISNSMFCY-QHGDOQTNSA-N
SMILES
C[C@H]1CC[C@H](Cn2c(N3CCOC4CCCCC43)nc3nc(-c4noc(=O)[nH]4)nc(-c4cncc(Cl)c4)c32)CC1
Aliases
BDBM224212 (preferred) BDBM224212 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM224212 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM224212 Open - 10.7270/Q2RF5X1F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@H]1CC[C@H](Cn2c(N3CCOC4CCCCC43)nc3nc(-c4noc(=O)[nH]4)nc(-c4cncc(Cl)c4)c32)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010640/BDB010640.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010640/BDB010640.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010640/BDB010640.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010640/BDB010640.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010640/BDB010640.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM224212 IC50 35 nM High DOI: 10.7270/Q2RF5X1F 1