< Back to small molecule database

US20260008770, Example 79

E3L010991
Internal ID: BDB010991
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB010991/BDB010991.sdf
Basic Properties
Compound ID
E3L010991
Internal ID
BDB010991
Molecular formula
C29H31F3N6
Molecular weight
520.603000
Exact mass
520.256230
XLogP
6.0408
TPSA
51.7700
HBA / HBD
4 / 0
Rotatable bonds
5
Heavy atoms / rings
38 / 6
Activity summary
IC50 unknown 35.00000000 nM
1 activity record(s) imported
InChIKey
CBCMNHSVHWRTHH-UHFFFAOYSA-N
SMILES
CC1=CCCN(Cc2cc(C(F)(F)F)c3cn(-c4cccc(C5(c6nncn6C)CC(C)C5)c4)nc3c2)C1
Aliases
BDBM227056 (preferred) US20260008770, Example 79 (source_name) BDBM227056 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B
reported_binder bindingdb_reported Yes No low BindingDB:BDBM227056 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM227056 Open - 10.7270/Q2377FJ5
PubChem CID178290412 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1=CCCN(Cc2cc(C(F)(F)F)c3cn(-c4cccc(C5(c6nncn6C)CC(C)C5)c4)nc3c2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB010991/BDB010991.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB010991/BDB010991.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB010991/BDB010991.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB010991/BDB010991.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB010991/BDB010991.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component
BindingDB:BDBM227056 IC50 35 nM High DOI: 10.7270/Q2377FJ5 1