< Back to small molecule database

BDBM227687

E3L011075
Internal ID: BDB011075
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB011075/BDB011075.sdf
Basic Properties
Compound ID
E3L011075
Internal ID
BDB011075
Molecular formula
C29H28ClN7O2
Molecular weight
542.043000
Exact mass
541.199301
XLogP
5.7912
TPSA
115.3800
HBA / HBD
7 / 1
Rotatable bonds
6
Heavy atoms / rings
39 / 7
Activity summary
IC50 unknown 17.00000000 nM
1 activity record(s) imported
InChIKey
DCKZOBRVRDJSAJ-IYARVYRRSA-N
SMILES
C[C@H]1CC[C@H](Cn2c(C3(c4ccccn4)CC3)nc3nc(-c4nc(=O)o[nH]4)nc(-c4cccc(Cl)c4)c32)CC1
Aliases
BDBM227687 (preferred) BDBM227687 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM227687 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM227687 Open - 10.7270/Q2RF5X1F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@H]1CC[C@H](Cn2c(C3(c4ccccn4)CC3)nc3nc(-c4nc(=O)o[nH]4)nc(-c4cccc(Cl)c4)c32)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011075/BDB011075.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011075/BDB011075.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011075/BDB011075.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011075/BDB011075.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011075/BDB011075.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM227687 IC50 17 nM High DOI: 10.7270/Q2RF5X1F 1