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BDBM237613

E3L011495
Internal ID: BDB011495
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011495/BDB011495.sdf
Basic Properties
Compound ID
E3L011495
Internal ID
BDB011495
Molecular formula
C24H26N4O2S
Molecular weight
434.565000
Exact mass
434.177647
XLogP
3.1536
TPSA
87.4600
HBA / HBD
5 / 3
Rotatable bonds
5
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 1403.00000000 nM
2 activity record(s) imported
InChIKey
OULGXBSFUJVITE-YWZLYKJASA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CSc2c(N)cccc2N(Cc2cccc3ccccc23)C1=O
Aliases
BDBM237613 (preferred) (2S)-N-[(3R)-9-amino-5-(naphthalen-1-ylmethyl)-4-oxo-2,3-dihydro-1,5-benzothiazepin-3-yl]-2-(methylamino)propanamide (source_name) BDBM237613 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM237613 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM237613 Open - 10.7270/Q2X92968
PubChem CID73058101 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CSc2c(N)cccc2N(Cc2cccc3ccccc23)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011495/BDB011495.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011495/BDB011495.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011495/BDB011495.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011495/BDB011495.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011495/BDB011495.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component 		BindingDB:BDBM237613 IC50 >54800 nM Low DOI: 10.7270/Q2X92968 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component 		BindingDB:BDBM237613 IC50 1403 nM Low DOI: 10.7270/Q2X92968 1