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BDBM238902

E3L011579
Internal ID: BDB011579
Activity data available Local docking-ready structure
Dock with O15151 Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB011579/BDB011579.sdf
Basic Properties
Compound ID
E3L011579
Internal ID
BDB011579
Molecular formula
C28H27Cl2N5O2
Molecular weight
536.463000
Exact mass
535.154180
XLogP
7.5997
TPSA
72.2800
HBA / HBD
4 / 1
Rotatable bonds
5
Heavy atoms / rings
37 / 5
Activity summary
IC50 unknown 3.10000000 nM
3 activity record(s) imported
InChIKey
YMTOKOZHNSRSHG-UHFFFAOYSA-N
SMILES
COc1ccncc1-c1nc2c(n1C(C)C)C(c1ccc(Cl)cc1C)N(c1cc(Cl)ccc1C)C(=O)N2
Aliases
BDBM238902 (preferred) 6-(4-Chloro-2-methylphenyl)-1-(5-chloro-2-methylphenyl)-8-(4-methoxy-3-pyridinyl)-7-propan-2-yl-3,6-dihydropurin-2-one (source_name) BDBM238902 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O15151 MDM4;MDMX
Protein Mdm4		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM238902 medium
; target=E3 ubiquitin-protein ligase Mdm2
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM238902 medium
; target=Cellular tumor antigen p53; E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM238902 Open - 10.7270/Q2Z31XKH
PubChem CID90303607 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ccncc1-c1nc2c(n1C(C)C)C(c1ccc(Cl)cc1C)N(c1cc(Cl)ccc1C)C(=O)N2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011579/BDB011579.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011579/BDB011579.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011579/BDB011579.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011579/BDB011579.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011579/BDB011579.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cellular tumor antigen p53
Q00987
E3 ligase component 		BindingDB:BDBM238902 IC50 3.1 nM Very high DOI: 10.7270/Q2Z31XKH 1
E3 ubiquitin-protein ligase Mdm2
O15151
E3 ligase component 		BindingDB:BDBM238902 IC50 16690 nM Low DOI: 10.7270/Q2Z31XKH 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM238902 IC50 16690 nM Low DOI: 10.7270/Q2Z31XKH 1