< Back to small molecule database

BDBM240239

E3L011674
Internal ID: BDB011674
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011674/BDB011674.sdf
Basic Properties
Compound ID
E3L011674
Internal ID
BDB011674
Molecular formula
C31H31N5O3
Molecular weight
521.621000
Exact mass
521.242690
XLogP
3.8295
TPSA
94.6400
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
39 / 5
Activity summary
IC50 unknown 520.00000000 nM
2 activity record(s) imported
InChIKey
WZIJQOUXQZOANR-LVXARBLLSA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccncc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
Aliases
BDBM240239 (preferred) BDBM240239 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM240239 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM240239 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccncc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011674/BDB011674.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011674/BDB011674.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011674/BDB011674.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011674/BDB011674.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011674/BDB011674.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM240239 IC50 >54800 nM Low DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM240239 IC50 520 nM Moderate DOI: 10.7270/Q2W097X3 1