< Back to small molecule database

BDBM240881

E3L011696
Internal ID: BDB011696
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011696/BDB011696.sdf
Basic Properties
Compound ID
E3L011696
Internal ID
BDB011696
Molecular formula
C57H66BrN9O8
Molecular weight
1085.114000
Exact mass
1083.421772
XLogP
5.5859
TPSA
210.6200
HBA / HBD
10 / 6
Rotatable bonds
17
Heavy atoms / rings
75 / 8
Activity summary
IC50 unknown 1.25000000 nM
2 activity record(s) imported
InChIKey
YDWVAMSAICGKJN-BOPKTTDVSA-N
SMILES
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@H](NC(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)cc2)C[C@@H]1C(=O)NCc1ccccc1)C1CCCCC1
Aliases
BDBM240881 (preferred) BDBM240881 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM240881 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM240881 Open - 10.7270/Q2R78D4N
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@H](NC(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)cc2)C[C@@H]1C(=O)NCc1ccccc1)C1CCCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011696/BDB011696.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011696/BDB011696.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011696/BDB011696.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011696/BDB011696.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011696/BDB011696.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM240881 IC50 1.25 nM Very high DOI: 10.7270/Q2R78D4N 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM240881 IC50 27 nM High DOI: 10.7270/Q2R78D4N 1