< Back to small molecule database

BDBM242608

E3L011766
Internal ID: BDB011766
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011766/BDB011766.sdf
Basic Properties
Compound ID
E3L011766
Internal ID
BDB011766
Molecular formula
C34H31BrN4O5
Molecular weight
655.549000
Exact mass
654.147782
XLogP
4.8538
TPSA
108.0500
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
44 / 6
Activity summary
IC50 unknown 5000.00000000 nM
2 activity record(s) imported
InChIKey
FYPLXCGGIXAPHV-NSOVKSMOSA-N
SMILES
COc1ccc2cc(Br)ccc2c1CN1C(=O)[C@@H](NC(=O)[C@@H]2CCN2)CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc21
Aliases
BDBM242608 (preferred) BDBM242608 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM242608 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM242608 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ccc2cc(Br)ccc2c1CN1C(=O)[C@@H](NC(=O)[C@@H]2CCN2)CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011766/BDB011766.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011766/BDB011766.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011766/BDB011766.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011766/BDB011766.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011766/BDB011766.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242608 IC50 5000 nM Low DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242608 IC50 >54800 nM Low DOI: 10.7270/Q2W097X3 1