< Back to small molecule database

BDBM242633

E3L011790
Internal ID: BDB011790
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011790/BDB011790.sdf
Basic Properties
Compound ID
E3L011790
Internal ID
BDB011790
Molecular formula
C33H28ClF2N5O4
Molecular weight
632.067000
Exact mass
631.179788
XLogP
5.2526
TPSA
114.7700
HBA / HBD
6 / 2
Rotatable bonds
8
Heavy atoms / rings
45 / 5
Activity summary
IC50 unknown 35.00000000 nM
2 activity record(s) imported
InChIKey
SXXGANNPODJWEW-SIBVEZHUSA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C#N)cc2)c2cc(Cl)ccc2N(Cc2c(OC(F)F)ccc3ccccc23)C1=O
Aliases
BDBM242633 (preferred) BDBM242633 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM242633 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM242633 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C#N)cc2)c2cc(Cl)ccc2N(Cc2c(OC(F)F)ccc3ccccc23)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011790/BDB011790.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011790/BDB011790.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011790/BDB011790.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011790/BDB011790.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011790/BDB011790.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242633 IC50 36900 nM Low DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242633 IC50 35 nM High DOI: 10.7270/Q2W097X3 1