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BDBM242652

E3L011809
Internal ID: BDB011809
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011809/BDB011809.sdf
Basic Properties
Compound ID
E3L011809
Internal ID
BDB011809
Molecular formula
C29H33N5O4
Molecular weight
515.614000
Exact mass
515.253255
XLogP
2.4278
TPSA
103.0100
HBA / HBD
6 / 3
Rotatable bonds
4
Heavy atoms / rings
38 / 6
Activity summary
IC50 unknown 358.00000000 nM
2 activity record(s) imported
InChIKey
ILJSXABYHBJFSO-MBSDFSHPSA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CN2CCCNC(=O)c3ccc4c(c(OC)ccc4c3)CN(C1=O)c1ccccc12
Aliases
BDBM242652 (preferred) BDBM242652 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM242652 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM242652 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CN2CCCNC(=O)c3ccc4c(c(OC)ccc4c3)CN(C1=O)c1ccccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011809/BDB011809.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011809/BDB011809.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011809/BDB011809.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011809/BDB011809.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011809/BDB011809.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242652 IC50 19000 nM Low DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242652 IC50 358 nM Moderate DOI: 10.7270/Q2W097X3 1