< Back to small molecule database

BDBM242662

E3L011818
Internal ID: BDB011818
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011818/BDB011818.sdf
Basic Properties
Compound ID
E3L011818
Internal ID
BDB011818
Molecular formula
C29H31N5O5
Molecular weight
529.597000
Exact mass
529.232519
XLogP
1.9544
TPSA
120.0800
HBA / HBD
6 / 3
Rotatable bonds
4
Heavy atoms / rings
39 / 6
Activity summary
IC50 unknown 19.00000000 nM
2 activity record(s) imported
InChIKey
RRJQCQZSAWTOKG-JTSKRJEESA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CN2C(=O)CCNC(=O)c3ccc4c(c(OC)ccc4c3)CN(C1=O)c1ccccc12
Aliases
BDBM242662 (preferred) BDBM242662 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM242662 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM242662 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CN2C(=O)CCNC(=O)c3ccc4c(c(OC)ccc4c3)CN(C1=O)c1ccccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011818/BDB011818.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011818/BDB011818.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011818/BDB011818.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011818/BDB011818.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011818/BDB011818.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242662 IC50 42950 nM Low DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242662 IC50 19 nM High DOI: 10.7270/Q2W097X3 1