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BDBM242679

E3L011835
Internal ID: BDB011835
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011835/BDB011835.sdf
Basic Properties
Compound ID
E3L011835
Internal ID
BDB011835
Molecular formula
C38H32N8O4
Molecular weight
664.726000
Exact mass
664.254652
XLogP
4.2578
TPSA
164.2200
HBA / HBD
8 / 2
Rotatable bonds
8
Heavy atoms / rings
50 / 6
Activity summary
IC50 unknown 18.00000000 nM
2 activity record(s) imported
InChIKey
HBKKLPXJCFYOFR-FWUCURJTSA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2cc(C#N)ccc2N(Cc2nn(-c3ccccc3C#N)c3ccccc23)C1=O
Aliases
BDBM242679 (preferred) BDBM242679 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM242679 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM242679 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2cc(C#N)ccc2N(Cc2nn(-c3ccccc3C#N)c3ccccc23)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011835/BDB011835.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011835/BDB011835.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011835/BDB011835.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011835/BDB011835.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011835/BDB011835.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242679 IC50 18 nM High DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM242679 IC50 >54800 nM Low DOI: 10.7270/Q2W097X3 1