< Back to small molecule database

BDBM243101

E3L011940
Internal ID: BDB011940
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011940/BDB011940.sdf
Basic Properties
Compound ID
E3L011940
Internal ID
BDB011940
Molecular formula
C35H35BrN4O5
Molecular weight
671.592000
Exact mass
670.179082
XLogP
5.4899
TPSA
108.0500
HBA / HBD
6 / 2
Rotatable bonds
9
Heavy atoms / rings
45 / 5
Activity summary
IC50 unknown 14.00000000 nM
2 activity record(s) imported
InChIKey
CZTUMEJKHNBRMB-LGGPFLRQSA-N
SMILES
CCN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
Aliases
BDBM243101 (preferred) BDBM243101 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM243101 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM243101 Open - 10.7270/Q2W097X3
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(C)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011940/BDB011940.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011940/BDB011940.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011940/BDB011940.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011940/BDB011940.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011940/BDB011940.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM243101 IC50 14 nM High DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM243101 IC50 >54800 nM Low DOI: 10.7270/Q2W097X3 1