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BDBM243137

E3L011973
Internal ID: BDB011973
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB011973/BDB011973.sdf
Basic Properties
Compound ID
E3L011973
Internal ID
BDB011973
Molecular formula
C33H35N5O5S
Molecular weight
613.740000
Exact mass
613.235890
XLogP
3.9414
TPSA
127.9200
HBA / HBD
6 / 3
Rotatable bonds
8
Heavy atoms / rings
44 / 5
Activity summary
IC50 unknown 211.00000000 nM
2 activity record(s) imported
InChIKey
ZHJFFSZYMNJXMF-ZTOMLWHTSA-N
SMILES
CN[C@@H](C)C(=O)N[C@H]1CN(S(=O)(=O)c2ccc(NC(C)=O)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O
Aliases
BDBM243137 (preferred) (2S)-N-[(3S)-1-(4-acetamidophenyl)sulfonyl-5-[(2-methylnaphthalen-1-yl)methyl]-4-oxo-2,3-dihydro-1,5-benzodiazepin-3-yl]-2-(methylamino)propanamide (source_name) BDBM243137 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM243137 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM243137 Open - 10.7270/Q2W097X3
PubChem CID118077226 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)N[C@H]1CN(S(=O)(=O)c2ccc(NC(C)=O)cc2)c2ccccc2N(Cc2c(C)ccc3ccccc23)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB011973/BDB011973.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB011973/BDB011973.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB011973/BDB011973.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB011973/BDB011973.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB011973/BDB011973.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component 		BindingDB:BDBM243137 IC50 >54800 nM Low DOI: 10.7270/Q2W097X3 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component 		BindingDB:BDBM243137 IC50 211 nM Moderate DOI: 10.7270/Q2W097X3 1