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BDBM259625

E3L012264
Internal ID: BDB012264
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB012264/BDB012264.sdf
Basic Properties
Compound ID
E3L012264
Internal ID
BDB012264
Molecular formula
C25H31N5O3
Molecular weight
449.555000
Exact mass
449.242690
XLogP
4.1290
TPSA
113.7700
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
33 / 5
Activity summary
IC50 unknown 5450.00000000 nM
1 activity record(s) imported
InChIKey
WWVDXSBPLKUBDQ-IYARVYRRSA-N
SMILES
O=C(CCc1nc2ccccc2c(=O)[nH]1)N[C@H]1CC[C@H](c2nnc(C3CCCCC3)o2)CC1
Aliases
BDBM259625 (preferred) BDBM259625 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM259625 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM259625 Open - 10.7270/Q2FN154F
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(CCc1nc2ccccc2c(=O)[nH]1)N[C@H]1CC[C@H](c2nnc(C3CCCCC3)o2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB012264/BDB012264.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB012264/BDB012264.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB012264/BDB012264.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB012264/BDB012264.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB012264/BDB012264.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM259625 IC50 5450 nM Low DOI: 10.7270/Q2FN154F 1