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US10022354, Example 37

E3L012783
Internal ID: BDB012783
Activity data available Local docking-ready structure
Dock with P29375
Structure
/e3_file/ligand_db/generated/BDB012783/BDB012783.sdf
Basic Properties
Compound ID
E3L012783
Internal ID
BDB012783
Molecular formula
C14H20N6O
Molecular weight
288.355000
Exact mass
288.169859
XLogP
1.5202
TPSA
79.7000
HBA / HBD
4 / 1
Rotatable bonds
3
Heavy atoms / rings
21 / 3
Activity summary
IC50 unknown 5.80000000 nM
1 activity record(s) imported
InChIKey
WQRNKDNUTZJPOS-UHFFFAOYSA-N
SMILES
Cc1cn(C2CCN(C(=O)c3cc(C(C)C)[nH]n3)C2)nn1
Aliases
BDBM281097 (preferred) US10022354, Example 37 (source_name) BDBM281097 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P29375 KDM5A;JARID1A;RBBP2;RBP2
Lysine-specific demethylase 5A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM281097 medium
; target=Lysine-specific demethylase 5A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM281097 Open - 10.7270/Q2PC34F7
PubChem CID121279685 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cn(C2CCN(C(=O)c3cc(C(C)C)[nH]n3)C2)nn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB012783/BDB012783.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB012783/BDB012783.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB012783/BDB012783.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB012783/BDB012783.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB012783/BDB012783.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Lysine-specific demethylase 5A
P29375
E3 ligase component 		BindingDB:BDBM281097 IC50 5.8 nM Very high DOI: 10.7270/Q2PC34F7 1