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US9580437, Example 29

E3L013031
Internal ID: BDB013031
Activity data available Local docking-ready structure
Dock with O75530
Structure
/e3_file/ligand_db/generated/BDB013031/BDB013031.sdf
Basic Properties
Compound ID
E3L013031
Internal ID
BDB013031
Molecular formula
C25H26N6O3S
Molecular weight
490.589000
Exact mass
490.178710
XLogP
2.8640
TPSA
110.5100
HBA / HBD
8 / 2
Rotatable bonds
6
Heavy atoms / rings
35 / 6
Activity summary
IC50 unknown 8.10000000 nM
6 activity record(s) imported
InChIKey
NOOTVYAYPNGLDI-UHFFFAOYSA-N
SMILES
O=S(=O)(c1ccc(-c2cnc(NCc3cccc4c3CCO4)n3cnnc23)cc1)C1CCNCC1
Aliases
BDBM291714 (preferred) US9580437, Example 29 (source_name) BDBM291714 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM291714 medium
; target=Polycomb protein EED; Histone-lysine N-methyltransferase EZH2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM291714 Open - 10.7270/Q29W0JNH; 10.7270/Q24T6MD7
PubChem CID121432839 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=S(=O)(c1ccc(-c2cnc(NCc3cccc4c3CCO4)n3cnnc23)cc1)C1CCNCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB013031/BDB013031.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB013031/BDB013031.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB013031/BDB013031.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB013031/BDB013031.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB013031/BDB013031.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM291714 IC50 14 nM High DOI: 10.7270/Q24T6MD7 1
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM291714 IC50 214 nM Moderate DOI: 10.7270/Q24T6MD7 1
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM291714 IC50 8.1 nM Very high DOI: 10.7270/Q24T6MD7 1
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM291714 IC50 214 nM Moderate DOI: 10.7270/Q29W0JNH 1
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM291714 IC50 8.1 nM Very high DOI: 10.7270/Q29W0JNH 1
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM291714 IC50 14 nM High DOI: 10.7270/Q29W0JNH 1