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BDBM318010

E3L014056
Internal ID: BDB014056
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB014056/BDB014056.sdf
Basic Properties
Compound ID
E3L014056
Internal ID
BDB014056
Molecular formula
C18H24N6O2
Molecular weight
356.430000
Exact mass
356.196074
XLogP
0.5751
TPSA
88.5900
HBA / HBD
7 / 2
Rotatable bonds
3
Heavy atoms / rings
26 / 4
Activity summary
IC50 unknown 3020.00000000 nM
1 activity record(s) imported
InChIKey
VFXBLJYICQUSGU-UHFFFAOYSA-N
SMILES
CN1CCCc2c1nc(N1CCN(Cc3ncccc3O)CC1)[nH]c2=O
Aliases
BDBM318010 (preferred) 2-[4-[(3-Hydroxy-2-pyridinyl)methyl]piperazin-1-yl]-8-methyl-3,5,6,7-tetrahydropyrido[2,3-d]pyrimidin-4-one (source_name) BDBM318010 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM318010 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM318010 Open - 10.7270/Q26112CZ
PubChem CID136987050 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCCc2c1nc(N1CCN(Cc3ncccc3O)CC1)[nH]c2=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB014056/BDB014056.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB014056/BDB014056.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB014056/BDB014056.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB014056/BDB014056.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB014056/BDB014056.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM318010 IC50 3020 nM Low DOI: 10.7270/Q26112CZ 1