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BDBM318044

E3L014084
Internal ID: BDB014084
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB014084/BDB014084.sdf
Basic Properties
Compound ID
E3L014084
Internal ID
BDB014084
Molecular formula
C18H22F2N6O
Molecular weight
376.411000
Exact mass
376.182316
XLogP
1.1477
TPSA
68.3600
HBA / HBD
6 / 1
Rotatable bonds
3
Heavy atoms / rings
27 / 4
Activity summary
IC50 unknown 3530.00000000 nM
1 activity record(s) imported
InChIKey
YDGPFYFZYCIASD-UHFFFAOYSA-N
SMILES
CN1CCCc2c1nc(N1CCN(Cc3ncc(F)cc3F)CC1)[nH]c2=O
Aliases
BDBM318044 (preferred) 2-[4-[(3,5-Difluoro-2-pyridyl)methyl]piperazin-1-yl]-8-methyl-3,5,6,7-tetrahydropyrido[2,3-d]pyrimidin-4-one (source_name) BDBM318044 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM318044 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM318044 Open - 10.7270/Q26112CZ
PubChem CID136954083 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCCc2c1nc(N1CCN(Cc3ncc(F)cc3F)CC1)[nH]c2=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB014084/BDB014084.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB014084/BDB014084.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB014084/BDB014084.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB014084/BDB014084.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB014084/BDB014084.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM318044 IC50 3530 nM Low DOI: 10.7270/Q26112CZ 1