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PARP1-IN-19 free base

E3L014185
Internal ID: BDB014185
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB014185/BDB014185.sdf
Basic Properties
Compound ID
E3L014185
Internal ID
BDB014185
Molecular formula
C26H22FN7O2
Molecular weight
483.507000
Exact mass
483.181901
XLogP
2.8867
TPSA
110.8700
HBA / HBD
6 / 2
Rotatable bonds
4
Heavy atoms / rings
36 / 6
Activity summary
IC50 unknown 1.00000000 nM
1 activity record(s) imported
InChIKey
VYZWBJPXMPDKIZ-UHFFFAOYSA-N
SMILES
O=C(c1cc(Cc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCN(c2ccc3[nH]cnc3n2)CC1
Aliases
BDBM320266 (preferred) PARP1-IN-19 free base (source_name) BDBM320266 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM320266 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM320266 Open - 10.7270/Q26T0PRW
PubChem CID122632831 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(c1cc(Cc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCN(c2ccc3[nH]cnc3n2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB014185/BDB014185.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB014185/BDB014185.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB014185/BDB014185.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB014185/BDB014185.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB014185/BDB014185.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM320266 IC50 1 nM Very high DOI: 10.7270/Q26T0PRW 1