< Back to small molecule database

BDBM326318

E3L014339
Internal ID: BDB014339
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB014339/BDB014339.sdf
Basic Properties
Compound ID
E3L014339
Internal ID
BDB014339
Molecular formula
C23H24ClN5O2
Molecular weight
437.931000
Exact mass
437.161853
XLogP
5.2297
TPSA
89.6000
HBA / HBD
5 / 1
Rotatable bonds
4
Heavy atoms / rings
31 / 5
Activity summary
IC50 unknown 107.00000000 nM
1 activity record(s) imported
InChIKey
YZZDUNHDLCSNJT-CTYIDZIISA-N
SMILES
Cc1cn(C[C@H]2CC[C@H](C)CC2)c2c(-c3cccc(Cl)c3)nc(-c3noc(=O)[nH]3)nc12
Aliases
BDBM326318 (preferred) BDBM326318 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM326318 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM326318 Open - 10.7270/Q28917Z1
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cn(C[C@H]2CC[C@H](C)CC2)c2c(-c3cccc(Cl)c3)nc(-c3noc(=O)[nH]3)nc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB014339/BDB014339.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB014339/BDB014339.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB014339/BDB014339.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB014339/BDB014339.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB014339/BDB014339.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM326318 IC50 107 nM Moderate DOI: 10.7270/Q28917Z1 1