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BDBM336965

E3L014417
Internal ID: BDB014417
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB014417/BDB014417.sdf
Basic Properties
Compound ID
E3L014417
Internal ID
BDB014417
Molecular formula
C21H23N3O3
Molecular weight
365.433000
Exact mass
365.173942
XLogP
1.4725
TPSA
85.5900
HBA / HBD
5 / 2
Rotatable bonds
7
Heavy atoms / rings
27 / 3
Activity summary
IC50 unknown 550.00000000 nM
1 activity record(s) imported
InChIKey
JOVUEDKSBHZOHS-UHFFFAOYSA-N
SMILES
N#Cc1ccc(OCC(=O)NCC(O)CN2CCc3ccccc3C2)cc1
Aliases
BDBM336965 (preferred) 2-(4-cyanophenoxy)-N-[3-(3,4-dihydro-1H-isoquinolin-2-yl)-2-hydroxypropyl]acetamide (source_name) BDBM336965 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM336965 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM336965 Open - 10.7270/Q2J1058K
PubChem CID90328737 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1ccc(OCC(=O)NCC(O)CN2CCc3ccccc3C2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB014417/BDB014417.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB014417/BDB014417.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB014417/BDB014417.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB014417/BDB014417.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB014417/BDB014417.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM336965 IC50 550 nM Moderate DOI: 10.7270/Q2J1058K 1