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BDBM343776

E3L015038
Internal ID: BDB015038
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB015038/BDB015038.sdf
Basic Properties
Compound ID
E3L015038
Internal ID
BDB015038
Molecular formula
C24H24FNO3
Molecular weight
393.458000
Exact mass
393.174022
XLogP
3.9963
TPSA
52.9300
HBA / HBD
4 / 2
Rotatable bonds
6
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 5500.00000000 nM
1 activity record(s) imported
InChIKey
KZOSBTWJGWQECC-UHFFFAOYSA-N
SMILES
Oc1ccc(-c2cccc(OCC(O)CN3CCc4ccccc4C3)c2)cc1F
Aliases
BDBM343776 (preferred) 4-[3-[3-(3,4-dihydro-1H-isoquinolin-2-yl)-2-hydroxypropoxy]phenyl]-2-fluorophenol (source_name) BDBM343776 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM343776 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM343776 Open - 10.7270/Q26975QQ
PubChem CID90335164 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Oc1ccc(-c2cccc(OCC(O)CN3CCc4ccccc4C3)c2)cc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB015038/BDB015038.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB015038/BDB015038.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB015038/BDB015038.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB015038/BDB015038.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB015038/BDB015038.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM343776 IC50 5500 nM Low DOI: 10.7270/Q26975QQ 1