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BDBM343859

E3L015119
Internal ID: BDB015119
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB015119/BDB015119.sdf
Basic Properties
Compound ID
E3L015119
Internal ID
BDB015119
Molecular formula
C23H25N3O3
Molecular weight
391.471000
Exact mass
391.189592
XLogP
2.9502
TPSA
67.7100
HBA / HBD
6 / 1
Rotatable bonds
7
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 5500.00000000 nM
1 activity record(s) imported
InChIKey
QFVFBPDFNJQVTP-UHFFFAOYSA-N
SMILES
COc1ncc(-c2cccc(OCC(O)CN3CCc4ccccc4C3)c2)cn1
Aliases
BDBM343859 (preferred) 1-(3,4-dihydro-1H-isoquinolin-2-yl)-3-[3-(2-methoxypyrimidin-5-yl)phenoxy]propan-2-ol (source_name) BDBM343859 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM343859 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM343859 Open - 10.7270/Q26975QQ
PubChem CID90335168 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ncc(-c2cccc(OCC(O)CN3CCc4ccccc4C3)c2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB015119/BDB015119.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB015119/BDB015119.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB015119/BDB015119.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB015119/BDB015119.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB015119/BDB015119.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM343859 IC50 5500 nM Low DOI: 10.7270/Q26975QQ 1