< Back to small molecule database

BDBM343992

E3L015251
Internal ID: BDB015251
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB015251/BDB015251.sdf
Basic Properties
Compound ID
E3L015251
Internal ID
BDB015251
Molecular formula
C24H34N2O2
Molecular weight
382.548000
Exact mass
382.262028
XLogP
3.5121
TPSA
44.7300
HBA / HBD
4 / 2
Rotatable bonds
11
Heavy atoms / rings
28 / 3
Activity summary
IC50 unknown 550.00000000 nM
1 activity record(s) imported
InChIKey
LGKISXCMYJVTNP-UHFFFAOYSA-N
SMILES
CCCCNCc1cccc(COCC(O)CN2CCc3ccccc3C2)c1
Aliases
BDBM343992 (preferred) 1-[[3-(butylaminomethyl)phenyl]methoxy]-3-(3,4-dihydro-1H-isoquinolin-2-yl)propan-2-ol (source_name) BDBM343992 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM343992 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM343992 Open - 10.7270/Q26975QQ
PubChem CID90335461 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCCNCc1cccc(COCC(O)CN2CCc3ccccc3C2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB015251/BDB015251.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB015251/BDB015251.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB015251/BDB015251.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB015251/BDB015251.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB015251/BDB015251.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM343992 IC50 550 nM Moderate DOI: 10.7270/Q26975QQ 1