< Back to small molecule database

BDBM349498

E3L016419
Internal ID: BDB016419
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB016419/BDB016419.sdf
Basic Properties
Compound ID
E3L016419
Internal ID
BDB016419
Molecular formula
C24H27N7O
Molecular weight
429.528000
Exact mass
429.227708
XLogP
3.4987
TPSA
107.2800
HBA / HBD
7 / 4
Rotatable bonds
4
Heavy atoms / rings
32 / 4
Activity summary
IC50 unknown 3.00000000 nM
1 activity record(s) imported
InChIKey
CXDDRMUOLXEPGY-AAJMVYRGSA-N
SMILES
CN/C=C(\C=N)c1cc2c(cc1C#N)N(c1cccc3c1N[C@H](C)CC(=O)N3)CCN2C
Aliases
BDBM349498 (preferred) BDBM349498 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM349498 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM349498 Open - 10.7270/Q2GM89FR
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN/C=C(\C=N)c1cc2c(cc1C#N)N(c1cccc3c1N[C@H](C)CC(=O)N3)CCN2C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB016419/BDB016419.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB016419/BDB016419.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB016419/BDB016419.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB016419/BDB016419.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB016419/BDB016419.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component
BindingDB:BDBM349498 IC50 3 nM Very high DOI: 10.7270/Q2GM89FR 1