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BDBM355821

E3L016498
Internal ID: BDB016498
Activity data available Local docking-ready structure
Dock with P51617
Structure
/e3_file/ligand_db/generated/BDB016498/BDB016498.sdf
Basic Properties
Compound ID
E3L016498
Internal ID
BDB016498
Molecular formula
C24H28N6O3
Molecular weight
448.527000
Exact mass
448.222289
XLogP
3.2641
TPSA
103.0700
HBA / HBD
5 / 2
Rotatable bonds
1
Heavy atoms / rings
33 / 5
Activity summary
IC50 > 5000.00000000 nM
1 activity record(s) imported
InChIKey
SYFRXWMCBTWRPE-UHFFFAOYSA-N
SMILES
O=C1Nc2cn(C3CCOCC3)nc2C(=O)NCCCCCn2cc(cn2)-c2cccc1c2
Aliases
BDBM355821 (preferred) 15-(Oxan-4-yl)-4,5,11,14,15,18-hexazatetracyclo[18.3.1.12,5.013,17]pentacosa-1(24),2(25),3,13,16,20,22-heptaene-12,19-dione (source_name) BDBM355821 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51617 IRAK1;IRAK
Interleukin-1 receptor-associated kinase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM355821 medium
; target=Interleukin-1 receptor-associated kinase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM355821 Open - 10.7270/Q2CZ39FC
PubChem CID122472077 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1Nc2cn(C3CCOCC3)nc2C(=O)NCCCCCn2cc(cn2)-c2cccc1c2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB016498/BDB016498.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB016498/BDB016498.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB016498/BDB016498.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB016498/BDB016498.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB016498/BDB016498.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Interleukin-1 receptor-associated kinase 1
P51617
E3 ligase component 		BindingDB:BDBM355821 IC50 >5000 nM Low DOI: 10.7270/Q2CZ39FC 1