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US10246467, Example I-12

E3L016615
Internal ID: BDB016615
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB016615/BDB016615.sdf
Basic Properties
Compound ID
E3L016615
Internal ID
BDB016615
Molecular formula
C31H25Cl2FN4O5
Molecular weight
623.468000
Exact mass
622.118603
XLogP
5.8481
TPSA
105.9200
HBA / HBD
6 / 2
Rotatable bonds
5
Heavy atoms / rings
43 / 8
Activity summary
IC50 unknown 986.00000000 nM
3 activity record(s) imported
InChIKey
JURMESUCSRKLSS-OVRLWXHPSA-N
SMILES
COc1cc2nn3c(c2cc1C(=O)O)OC[C@@H]1[C@H]3[C@@H](c2cccc(Cl)c2F)[C@@]2(C(=O)Nc3cc(Cl)ccc32)N1CC1CC1
Aliases
BDBM374741 (preferred) US10246467, Example I-12 (source_name) BDBM374741 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM374741 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM374741 Open - 10.7270/Q2Z03C8K; 10.7270/Q26W9GD1; 10.7270/Q2VX0JT2
PubChem CID130376436 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc2nn3c(c2cc1C(=O)O)OC[C@@H]1[C@H]3[C@@H](c2cccc(Cl)c2F)[C@@]2(C(=O)Nc3cc(Cl)ccc32)N1CC1CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB016615/BDB016615.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB016615/BDB016615.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB016615/BDB016615.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB016615/BDB016615.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB016615/BDB016615.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM374741 IC50 986 nM Moderate DOI: 10.7270/Q26W9GD1 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM374741 IC50 986 nM Moderate DOI: 10.7270/Q2VX0JT2 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM374741 IC50 986 nM Moderate DOI: 10.7270/Q2Z03C8K 1