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BDBM419699

E3L017579
Internal ID: BDB017579
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB017579/BDB017579.sdf
Basic Properties
Compound ID
E3L017579
Internal ID
BDB017579
Molecular formula
C28H35N5O2
Molecular weight
473.621000
Exact mass
473.279075
XLogP
3.5749
TPSA
80.4700
HBA / HBD
5 / 3
Rotatable bonds
5
Heavy atoms / rings
35 / 5
Activity summary
IC50 unknown 52.00000000 nM
1 activity record(s) imported
InChIKey
USVWYSZMSMGXJG-UHFFFAOYSA-N
SMILES
CCNC(=O)c1ccc(N2CCN(Cc3cc(C)c4c5c(c(=O)[nH]c4c3)CCCN5)CC2)c(C)c1
Aliases
BDBM419699 (preferred) N-ethyl-3-methyl-4-[4-[(10-methyl-5-oxo-2,3,4,6-tetrahydro-1H-benzo[h][1,6]naphthyridin-8-yl)methyl]piperazin-1-yl]benzamide (source_name) BDBM419699 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM419699 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM419699 Open - 10.7270/Q2736T8M
PubChem CID134595866 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCNC(=O)c1ccc(N2CCN(Cc3cc(C)c4c5c(c(=O)[nH]c4c3)CCCN5)CC2)c(C)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB017579/BDB017579.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB017579/BDB017579.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB017579/BDB017579.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB017579/BDB017579.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB017579/BDB017579.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM419699 IC50 52 nM High DOI: 10.7270/Q2736T8M 1