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BDBM419823

E3L017703
Internal ID: BDB017703
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB017703/BDB017703.sdf
Basic Properties
Compound ID
E3L017703
Internal ID
BDB017703
Molecular formula
C25H24FN5O
Molecular weight
429.499000
Exact mass
429.196489
XLogP
3.3601
TPSA
75.1600
HBA / HBD
5 / 2
Rotatable bonds
3
Heavy atoms / rings
32 / 6
Activity summary
IC50 unknown 9.41000000 nM
1 activity record(s) imported
InChIKey
AMWNTQXPBJQZET-ROUUACIJSA-N
SMILES
N#Cc1ccc(N2C[C@@H]3C[C@H]2CN3Cc2ccc3c4c(c(=O)[nH]c3c2)CCCN4)c(F)c1
Aliases
BDBM419823 (preferred) 3-fluoro-4-[(1S,4S)-5-[(5-oxo-2,3,4,6-tetrahydro-1H-benzo[h][1,6]naphthyridin-8-yl)methyl]-2,5-diazabicyclo[2.2.1]heptan-2-yl]benzonitrile (source_name) BDBM419823 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM419823 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM419823 Open - 10.7270/Q2736T8M
PubChem CID124134779 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1ccc(N2C[C@@H]3C[C@H]2CN3Cc2ccc3c4c(c(=O)[nH]c3c2)CCCN4)c(F)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB017703/BDB017703.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB017703/BDB017703.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB017703/BDB017703.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB017703/BDB017703.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB017703/BDB017703.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM419823 IC50 9.41 nM Very high DOI: 10.7270/Q2736T8M 1