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US10501466, Example B7

E3L017816
Internal ID: BDB017816
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB017816/BDB017816.sdf
Basic Properties
Compound ID
E3L017816
Internal ID
BDB017816
Molecular formula
C23H28N4O2
Molecular weight
392.503000
Exact mass
392.221226
XLogP
2.8583
TPSA
67.2300
HBA / HBD
3 / 1
Rotatable bonds
3
Heavy atoms / rings
29 / 5
Activity summary
Ki unknown 33.00000000 nM
1 activity record(s) imported
InChIKey
BKBBJFFASFNPGD-UHFFFAOYSA-N
SMILES
CC(=O)N1CCCC(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)C1
Aliases
BDBM423372 (preferred) US10501466, Example B7 (source_name) BDBM423372 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM423372 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM423372 Open - 10.7270/Q2319Z71
PubChem CID138470440 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)N1CCCC(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB017816/BDB017816.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB017816/BDB017816.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB017816/BDB017816.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB017816/BDB017816.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB017816/BDB017816.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM423372 Ki 33 nM High DOI: 10.7270/Q2319Z71 1