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US10570140, Example 61

E3L018163
Internal ID: BDB018163
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB018163/BDB018163.sdf
Basic Properties
Compound ID
E3L018163
Internal ID
BDB018163
Molecular formula
C20H19F4N3O4
Molecular weight
441.381000
Exact mass
441.131169
XLogP
2.6405
TPSA
100.6300
HBA / HBD
6 / 3
Rotatable bonds
3
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 16.00000000 nM
2 activity record(s) imported
InChIKey
YUOKSWIONSHHRB-DARIXABFSA-N
SMILES
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(F)c(C(F)(F)F)c2)[C@@](C)(O)[C@H]1O
Aliases
BDBM435703 (preferred) US10570140, Example 61 (source_name) BDBM435703 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM435703 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM435703 Open - 10.7270/Q2WM1GTT; 10.7270/Q2N58QJ4
PubChem CID137479823 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(F)c(C(F)(F)F)c2)[C@@](C)(O)[C@H]1O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB018163/BDB018163.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB018163/BDB018163.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB018163/BDB018163.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB018163/BDB018163.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB018163/BDB018163.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM435703 IC50 16 nM High DOI: 10.7270/Q2N58QJ4 1
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM435703 IC50 16 nM High DOI: 10.7270/Q2WM1GTT 1