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BDBM438019

E3L018603
Internal ID: BDB018603
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB018603/BDB018603.sdf
Basic Properties
Compound ID
E3L018603
Internal ID
BDB018603
Molecular formula
C25H21FN8O2
Molecular weight
484.495000
Exact mass
484.177150
XLogP
2.8516
TPSA
125.4500
HBA / HBD
6 / 2
Rotatable bonds
4
Heavy atoms / rings
36 / 6
Activity summary
IC50 unknown 3.20000000 nM
2 activity record(s) imported
InChIKey
IIHNIPMYEGRKDY-UHFFFAOYSA-N
SMILES
CC1CN(C(=O)c2cc(Cc3n[nH]c(=O)c4ccccc34)ccc2F)Cc2nnc(-c3ncc[nH]3)n21
Aliases
BDBM438019 (preferred) 4-[[4-fluoro-3-[3-(1H-imidazol-2-yl)-5-methyl-6,8-dihydro-5H-[1,2,4]triazolo[4,3-a]pyrazine-7-carbonyl]phenyl]methyl]-2H-phthalazin-1-one (source_name) BDBM438019 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM438019 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM438019 Open - 10.7270/Q2TM7F43; 10.7270/Q2445S6B PMID: 37567056
PubChem CID140912461 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1CN(C(=O)c2cc(Cc3n[nH]c(=O)c4ccccc34)ccc2F)Cc2nnc(-c3ncc[nH]3)n21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB018603/BDB018603.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB018603/BDB018603.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB018603/BDB018603.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB018603/BDB018603.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB018603/BDB018603.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM438019 IC50 3.2 nM Very high DOI: 10.7270/Q2445S6B
PMID: 37567056 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM438019 IC50 <5 nM Very high DOI: 10.7270/Q2TM7F43 1