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Thioparib

E3L018609
Internal ID: BDB018609
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB018609/BDB018609.sdf
Basic Properties
Compound ID
E3L018609
Internal ID
BDB018609
Molecular formula
C25H20FN7O2S
Molecular weight
501.547000
Exact mass
501.138322
XLogP
3.5850
TPSA
109.6600
HBA / HBD
7 / 1
Rotatable bonds
4
Heavy atoms / rings
36 / 6
Activity summary
IC50 < 5.00000000 nM
1 activity record(s) imported
InChIKey
ACJDTAHNIFCCHB-UHFFFAOYSA-N
SMILES
CC1CN(C(=O)c2cc(Cc3n[nH]c(=O)c4ccccc34)ccc2F)Cc2nnc(-c3nccs3)n21
Aliases
BDBM438050 (preferred) Thioparib (source_name) BDBM438050 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM438050 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM438050 Open - 10.7270/Q2TM7F43
PubChem CID140912420 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1CN(C(=O)c2cc(Cc3n[nH]c(=O)c4ccccc34)ccc2F)Cc2nnc(-c3nccs3)n21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB018609/BDB018609.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB018609/BDB018609.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB018609/BDB018609.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB018609/BDB018609.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB018609/BDB018609.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM438050 IC50 <5 nM Very high DOI: 10.7270/Q2TM7F43 1