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(R)-6-Oxo-2,7-diazaspiro[4.4]nonane-2-carbonitrile

E3L018706
Internal ID: BDB018706
Activity data available Local docking-ready structure
Dock with Q6GQQ9
Structure
/e3_file/ligand_db/generated/BDB018706/BDB018706.sdf
Basic Properties
Compound ID
E3L018706
Internal ID
BDB018706
Molecular formula
C8H11N3O
Molecular weight
165.196000
Exact mass
165.090212
XLogP
-0.3205
TPSA
56.1300
HBA / HBD
3 / 1
Rotatable bonds
0
Heavy atoms / rings
12 / 2
Activity summary
IC50 unknown 5500.00000000 nM
2 activity record(s) imported
InChIKey
QEPOMPAAPNDUNU-MRVPVSSYSA-N
SMILES
N#CN1CC[C@]2(CCNC2=O)C1
Aliases
BDBM443290 (preferred) (R)-6-Oxo-2,7-diazaspiro[4.4]nonane-2-carbonitrile (source_name) BDBM443290 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6GQQ9 OTUD7B;ZA20D1
OTU domain-containing protein 7B (EC 3.4.19.12) (Cellular zinc finger anti-NF-kappa-B protein) (Cezanne) (Zinc finger A20 domain-containing protein 1) (Zinc finger protein Cezanne)		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM443290 medium
; target=OTU domain-containing protein 7B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM443290 Open - 10.7270/Q21V5J02; 10.7270/Q28P63QX
PubChem CID137378568 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#CN1CC[C@]2(CCNC2=O)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB018706/BDB018706.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB018706/BDB018706.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB018706/BDB018706.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB018706/BDB018706.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB018706/BDB018706.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
OTU domain-containing protein 7B
Q6GQQ9
E3 ligase component 		BindingDB:BDBM443290 IC50 5500 nM Low DOI: 10.7270/Q28P63QX 1
OTU domain-containing protein 7B
Q6GQQ9
E3 ligase component 		BindingDB:BDBM443290 IC50 5500 nM Low DOI: 10.7270/Q21V5J02 1