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BDBM443372

E3L018787
Internal ID: BDB018787
Activity data available Local docking-ready structure
Dock with Q6GQQ9
Structure
/e3_file/ligand_db/generated/BDB018787/BDB018787.sdf
Basic Properties
Compound ID
E3L018787
Internal ID
BDB018787
Molecular formula
C19H17N7O
Molecular weight
359.393000
Exact mass
359.149458
XLogP
2.2229
TPSA
109.7300
HBA / HBD
6 / 3
Rotatable bonds
1
Heavy atoms / rings
27 / 5
Activity summary
IC50 < 100.00000000 nM
1 activity record(s) imported
InChIKey
VVVXXUXVCSSAOM-UHFFFAOYSA-N
SMILES
Cc1ccc2[nH]ncc2c1-c1cnc2c(c1)NC(=O)C1(CCN(C#N)C1)N2
Aliases
BDBM443372 (preferred) 7-(5-methyl-1H-indazol-4-yl)-2-oxospiro[1,4-dihydropyrido[2,3-b]pyrazine-3,3'-pyrrolidine]-1'-carbonitrile (source_name) BDBM443372 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6GQQ9 OTUD7B;ZA20D1
OTU domain-containing protein 7B (EC 3.4.19.12) (Cellular zinc finger anti-NF-kappa-B protein) (Cezanne) (Zinc finger A20 domain-containing protein 1) (Zinc finger protein Cezanne)		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM443372 medium
; target=OTU domain-containing protein 7B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM443372 Open - 10.7270/Q21V5J02
PubChem CID137480016 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc2[nH]ncc2c1-c1cnc2c(c1)NC(=O)C1(CCN(C#N)C1)N2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB018787/BDB018787.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB018787/BDB018787.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB018787/BDB018787.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB018787/BDB018787.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB018787/BDB018787.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
OTU domain-containing protein 7B
Q6GQQ9
E3 ligase component 		BindingDB:BDBM443372 IC50 <100 nM High DOI: 10.7270/Q21V5J02 1