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US10676479, Example 92

E3L019120
Internal ID: BDB019120
Activity data available Local docking-ready structure
Dock with O75530
Structure
/e3_file/ligand_db/generated/BDB019120/BDB019120.sdf
Basic Properties
Compound ID
E3L019120
Internal ID
BDB019120
Molecular formula
C25H23FN4O5S
Molecular weight
510.547000
Exact mass
510.137319
XLogP
3.6626
TPSA
111.8900
HBA / HBD
8 / 1
Rotatable bonds
7
Heavy atoms / rings
36 / 5
Activity summary
IC50 unknown 0.70000000 nM
3 activity record(s) imported
InChIKey
SAXBCTJESUGKOB-UHFFFAOYSA-N
SMILES
CCOC(=O)c1ncn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(S(C)(=O)=O)cc3)c12
Aliases
BDBM451062 (preferred) US10676479, Example 92 (source_name) BDBM451062 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED
reported_binder bindingdb_reported Yes No low BindingDB:BDBM451062 medium
; target=Histone-lysine N-methyltransferase EZH2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM451062 Open - 10.7270/Q2TQ64M9
PubChem CID139346246 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCOC(=O)c1ncn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(S(C)(=O)=O)cc3)c12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019120/BDB019120.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019120/BDB019120.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019120/BDB019120.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019120/BDB019120.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019120/BDB019120.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component
BindingDB:BDBM451062 IC50 0.7 nM Very high DOI: 10.7270/Q2TQ64M9 1
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component
BindingDB:BDBM451062 IC50 5.4 nM Very high DOI: 10.7270/Q2TQ64M9 1
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component
BindingDB:BDBM451062 IC50 5.9 nM Very high DOI: 10.7270/Q2TQ64M9 1